Product Name Catalog # Price   Qty
Human p53-Regulated cDNA Plate Array AP-0141 $648
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Characterization

Description(s):

p53 plays a crucial role in maintaining ordered proliferation, growth, and differentiation of normal cells. While p53 normally exists in the cell at a very low level and in a relatively inactive form, in response to cellular stress it accumulates in the nucleus, where it binds to specific DNA sequences. p53 is known to induce or inhibit the expression of more than 100 target genes. Mutations of the p53 gene is the most frequently encountered genetic event in cancer, thereby inactivating p53 and resulting in the disruption of the expression of target genes. Therefore, expression profiling of p53 target genes will facilitate the functional study of p53. 


Signosis has developed a plate-based array for profiling 20+ p53-regulated genes. By using this assay, researchers are able to compare gene expression in up to three samples on a single microtiter plate.

 

 


Applicable Grid:

List of Applicable Genes

  1 2 3 4 5 6 7 8 9 10 11 12
A 14-3-3 Cyclin B MSH2 14-3-3 Cyclin B MSH2 14-3-3 Cyclin B MSH2 14-3-3 Cyclin B MSH2
B B-actin GADD45 p21 B-actin GADD45 p21 B-actin GADD45 p21 B-actin GADD45 p21
C Bax HNF4A PTEN Bax HNF4A PTEN Bax HNF4A PTEN Bax HNF4A PTEN
D BCL-2 IGF-2 RB1 BCL-2 IGF-2 RB1 BCL-2 IGF-2 RB1 BCL-2 IGF-2 RB1
E cdc2 Jun Stat3 cdc2 Jun Stat3 cdc2 Jun Stat3 cdc2 Jun Stat3
F cdc25 MDM2 TGF beta cdc25 MDM2 TGF beta cdc25 MDM2 TGF beta cdc25 MDM2 TGF beta
G CDKN2A MDR1 TIMP-3 CDKN2A MDR1 TIMP-3 CDKN2A MDR1 TIMP-3 CDKN2A MDR1 TIMP-3
H c-myc MMP1 VEGF c-myc MMP1 VEGF c-myc MMP1 VEGF c-myc MMP1 VEGF

Principle

 

Signosis’ proprietary cDNA plate array is a plate-based hybridization profiling analysis for monitoring the expression of dozens of genes through reverse transcription of mRNA into cDNA. Like array analyses, total RNA is first reverse transcribed into cDNA in the presence of biotin-dUTP in the assay. Targeted genes are then specifically captured onto individual wells on a plate, instead of membranes, through a pre-coated gene-specific oligonucleotide. The captured cDNAs are further detected with streptavidin-HRP. Luminescence is reported as relative light units (RLUs) on a microplate luminometer. The expression level of genes is directly proportional to the luminescent intensity.

Data


Human p53-regulated cDNA plate array analysis.  Total RNAs from 293 and Hela were prepared. RNAs were subjected to p53-regulated cDNA plate assay, and detected with chemiluminence by a plate reader

Literature

View user manual

Citations

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2. Embryonic Overexpression of Receptors for Advanced Glycation End-Products by Alveolar Epithelium Induces an Imbalance between Proliferation and Apoptosis. Stogsdill JA1, Stogsdill MP, Porter JL, Hancock JM, Robinson AB, Reynolds PR. Am J Respir Cell Mol Biol Vol 47, Iss. 1, pp 60–66, Jul 2012

3. Δ-9,11 modifications of glucocorticoids dissociate NF-κB inhibitory efficacy from GRE-associated side effects. Baudy AR, Reeves E, Damsker J, Heier C, Garvin L, Dillingham BC, McCall J, Rayavarapu S, Wang Z, Vander Meulen J, Sali A, Jahnke V, Duguez S, Dubois D,Rose M, Nagaraju K, Hoffman E. J Pharmacol Exp Ther. 2012 Jul 3.

4. Stem cells from foreign body granulation tissue accelerate recovery from acute kidney injury. Patel J, Pancholi N, Gudehithlu KP, Sethupathi P, Hart PD, Dunea G, Arruda JA, Singh AK.  Nephrol Dial Transplant. 2012 May;27(5):1780-6. 

5. A novel vascular EET synthase: role of CYP2C7 Sun D, Jiang H, Wu H, Yang Y, Kaley G, Huang A. Am J Physiol Regul Integr Comp Physiol. 2011 Dec;301(6):R1723-30.

6. siRNA-mediated knockdown of aryl hydrocarbon receptor nuclear translocator 2 affects hypoxia-inducible factor-1 regulatory signaling and metabolism in human breast cancer cells. Edited by Judit Ovádi. Qin XY, Wei F, Yoshinaga J, Yonemoto J, Tanokura M, Sone H.  FEBS Lett. 2011 Oct 20;585(20):3310-5. 

7. Tasquinimod is an allosteric modulator of HDAC4 survival signaling within the compromised cancer microenvironment. Isaacs JT, Antony L, Dalrymple S, Brennen WN, Gerber S, Hammers H, Wissing MD, Kachhap SK, Luo J, Xing L,Bjork P, Olsson A, Björk A, Leanderson T. Cancer Res. 2012 Nov 13.

8. HIF-stabilizing bioactive glasses for directing MSC behaviour . MM Azevedo, O Tsigkou, R Nair, G Jell, J Jones… - Tissue Engineering, 2014

9.Nitration of the Tumor Suppressor Protein p53 at Tyrosine 327 Promotes p53 Oligomerization and Activation. Yakovlev VA, Bayden AS, Graves PR, Kellogg GE, Mikkelsen RB.  Biochemistry., 2010 Jun 29;49(25):5331-9. doi: 10.1021/bi100564w. 

10. Expression of Wnt3 activates Wnt/β-catenin pathway and promotes EMT-like phenotype intrastuzumab resistant HER2-overexpressing breast cancer cells. Vadgama JV, Wu Y, Ginther C, Kim J, Mosher N, Chung S, Slamon D. Mol Cancer Res. 2012 Oct 15. 

11. A83-01 inhibits TGF-β-induced upregulation of Wnt3 and epithelial to mesenchymal transition in HER2-overexpressing breast cancer cells. Yanyuan Wu, Trinh Tran, Sami Dwabe, Marianna Sarkissyan, Juri Kim, Miguel Nava, Sheilah Clayton, Richard Pietras, Robin Farias-Eisner, Jaydutt V. Vadgama. Breast Cancer Research and Treatment. 2017 March 23. doi: 10.1007/s10549-017-4211-y

12. Conditionally induced RAGE expression by proximal airway epithelial cells in transgenic mice causes lung inflammation.B Garrett Bodine, Brock G Bennion, Emma Leatham, Felix R Jimenez, Alex J Wright, Zac R Jergensen,Connor J Erickson, Cameron M Jones, Jeff P Johnson, Steven M Knapp and Paul R Reynolds . Respiratory Research, 2014 (Published online) 

13. Ablation of Doublecortin-Like Kinase 1 in the Colonic Epithelium Exacerbates Dextran Sulfate Sodium-Induced Colitis. D Qu, N Weygant, R May, P Chandrakesan. Plos One Published: August 18, 2015,  DOI: 10.1371/journal.pone.0134212